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1

Meningococcal Seroepidemiology 1 Year After the PsA-TT Mass Immunization Campaign in Burkina Faso

Tall, H., Yaro, S., Kpoda, H. B. N., Ouangraoua, S., Trotter, C. L., Njanpop Lafourcade, B.-M., Findlow, H., Bai, X., Martin, C., Nwakamma, I., Ouedraogo, J. B., Gessner, B. D., Borrow, R., Mueller, J

Journal:

Clinical Infectious Diseases

Year:

2015

Language:

english

File:

PDF, 198 KB

english, 2015

2

Impact of the addition of azithromycin to antimalarials used for seasonal malaria chemoprevention on antimicrobial resistance of Streptococcus pneumoniae

Hema‐Ouangraoua, Soumeya, Aziz Maiga, Abdoul, Cairns, Matthew, Zongo, Issaka, Frédéric, Nikiema, Serge Yerbanga, Rakiswendé, Tamboura, Boubou, Badji, Henry, Gore‐Langton, Georgia, Kuepfer, Irene, Tint

Journal:

Tropical Medicine & International Health

Year:

2019

Language:

english

File:

PDF, 9.64 MB

english, 2019

3

Local similarity between quotiented ordered trees

Aïda Ouangraoua, Pascal Ferraro, Laurent Tichit, Serge Dulucq

Journal:

Journal of Discrete Algorithms

Year:

2007

Language:

english

File:

PDF, 598 KB

english, 2007

4

A new constrained edit distance between quotiented ordered trees

Aïda Ouangraoua, Pascal Ferraro

Journal:

Journal of Discrete Algorithms

Year:

2009

Language:

english

File:

PDF, 924 KB

english, 2009

5

A constrained edit distance algorithm between semi-ordered trees

Aïda Ouangraoua, Pascal Ferraro

Journal:

Theoretical Computer Science

Year:

2009

Language:

english

File:

PDF, 925 KB

english, 2009

6

A new algorithm for aligning nested arc-annotated sequences under arbitrary weight schemes

Aïda Ouangraoua, Valentin Guignon, Sylvie Hamel, Cedric Chauve

Journal:

Theoretical Computer Science

Year:

2011

Language:

english

File:

PDF, 714 KB

english, 2011

7

Genome dedoubling by DCJ and reversal

Antoine Thomas, Jean-Stéphane Varré, Aïda Ouangraoua

Journal:

BMC Bioinformatics

Year:

2011

Language:

english

File:

PDF, 247 KB

english, 2011

8

Comparison of tree architecture using tree edit distances: application to 2-year-old apple hybrids

Vincent Segura, Aïda Ouangraoua, Pascal Ferraro, Evelyne Costes

Journal:

Year:

2008

Language:

english

File:

PDF, 283 KB

english, 2008

9

Impact d’un vaccin conjugué antiméningococcique « A » sur les méningites bactériennes notifiées à l’ouest du Burkina Faso (2009–2012); Impact of a conjugated anti meningococcal A vaccine on notification of bacterial meningitis in West Burkina Faso (2009–2012);

Ouangraoua, S., Schlumberger, M., Yaro, S., Ouédraogo, A. S., Sanou, S., Drabo, A., Yaméogo, T. M., Ouedraogo, R.

Journal:

Bulletin de la Société de pathologie exotique

Year:

2014

File:

PDF, 133 KB

2014

10

A 2-Approximation for the Minimum Duplication Speciation Problem

Ouangraoua, Aïda, Swenson, Krister M., Chauve, Cedric

Journal:

Journal of Computational Biology

Year:

2011

Language:

english

File:

PDF, 632 KB

english, 2011

11

Yeast Ancestral Genome Reconstructions: The Possibilities of Computational Methods II

Chauve, Cedric, Gavranovic, Haris, Ouangraoua, Aida, Tannier, Eric

Journal:

Journal of Computational Biology

Year:

2010

Language:

english

File:

PDF, 2.24 MB

english, 2010

12

Combinatorial Structure of Genome Rearrangements Scenarios

Ouangraoua, Aïda, Bergeron, Anne

Journal:

Journal of Computational Biology

Year:

2010

Language:

english

File:

PDF, 1.49 MB

english, 2010

13

On the Identification of Conflicting Contiguities in Ancestral Genome Reconstruction

Ouangraoua, Aïda, Raffinot, Mathieu

Journal:

Journal of Computational Biology

Year:

2014

Language:

english

File:

PDF, 577 KB

english, 2014

14

Theory and Practice of Ultra-Perfection

Ouangraoua, Aïda, Bergeron, Anne, Swenson, Krister M.

Journal:

Journal of Computational Biology

Year:

2011

Language:

english

File:

PDF, 1.23 MB

english, 2011

15

Parental HIV disclosure in Burkina Faso: Experiences and challenges in the era of HAART

Tiendrebeogo, Georges, Hejoaka, Fabienne, Belem, Edwige Mireille, Compaoré, Pascal Louis Germain, Wolmarans, Liezel, Soubeiga, André, Ouangraoua, Nathalie

Journal:

SAHARA-J Journal of Social Aspects of HIV/AIDS

Year:

2013

Language:

english

File:

PDF, 195 KB

english, 2013

16

Reconstructing the architecture of the ancestral amniote genome

Ouangraoua, A., Tannier, E., Chauve, C.

Journal:

Year:

2011

Language:

english

File:

PDF, 405 KB

english, 2011

17

ProCARs: Progressive Reconstruction of Ancestral Gene Orders

Perrin, Amandine, Varré, Jean-Stéphane, Blanquart, Samuel, Ouangraoua, Aïda

Journal:

Year:

2015

Language:

english

File:

PDF, 959 KB

english, 2015

18

The SCJ Small Parsimony Problem for Weighted Gene Adjacencies

Luhmann, Nina, Lafond, Manuel, Thevenin, Annelyse, Ouangraoua, Aida, Wittler, Roland, Chauve, Cedric

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2017

Language:

english

File:

PDF, 509 KB

english, 2017

19

Reconstructing a SuperGeneTree minimizing reconciliation

Manuel Lafond,Aïda Ouangraoua,Nadia El-Mabrouk

Journal:

BMC Bioinformatics

Year:

2015

Language:

english

File:

PDF, 1.14 MB

english, 2015

20

Gene Tree Construction and Correction using SuperTree and Reconciliation

Lafond, Manuel, Chauve, Cedric, El-Mabrouk, Nadia, Ouangraoua, Aida

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2017

Language:

english

File:

PDF, 1.17 MB

english, 2017

21

The Establishment and Diversification of Epidemic-Associated Serogroup W Meningococcus in the African Meningitis Belt, 1994 to 2012

Retchless, Adam C., Hu, Fang, Ouédraogo, Abdoul-Salam, Diarra, Seydou, Knipe, Kristen, Sheth, Mili, Rowe, Lori A., Sangaré, Lassana, Ky Ba, Absetou, Ouangraoua, Soumeya, Batra, Dhwani, Novak, Ryan T.,

Journal:

Year:

2016

Language:

english

File:

PDF, 408 KB

english, 2016

22

Reconstructing protein and gene phylogenies using reconciliation and soft-clustering

Kuitche, Esaie, Lafond, Manuel, Ouangraoua, Aïda

Journal:

Journal of Bioinformatics and Computational Biology

Year:

2017

Language:

english

File:

PDF, 3.42 MB

english, 2017

23

Early impact of 13-valent pneumococcal conjugate vaccine on pneumococcal meningitis—Burkina Faso, 2014–2015

Kambiré, Dinanibè, Soeters, Heidi M., Ouédraogo-Traoré, Rasmata, Medah, Isaïe, Sangaré, Lassana, Yaméogo, Issaka, Sawadogo, Guetawendé, Ouédraogo, Abdoul-Salam, Ouangraoua, Soumeya, McGee, Lesley, Sri

Journal:

Journal of Infection

Year:

2017

Language:

english

File:

PDF, 2.04 MB

english, 2017

24

Nationwide Trends in Bacterial Meningitis before the Introduction of 13-Valent Pneumococcal Conjugate Vaccine—Burkina Faso, 2011–2013

Kambiré, Dinanibè, Soeters, Heidi M., Ouédraogo-Traoré, Rasmata, Medah, Isaïe, Sangare, Lassana, Yaméogo, Issaka, Sawadogo, Guetawendé, Ouédraogo, Abdoul-Salam, Hema-Ouangraoua, Soumeya, McGee, Lesley

Journal:

Year:

2016

Language:

english

File:

PDF, 1.78 MB

english, 2016

25

Molecular characterization of invasive meningococcal isolates in Burkina Faso as the relative importance of serogroups X and W increases, 2008–2012

Retchless, Adam C., Congo-Ouédraogo, Malika, Kambiré, Dinanibè, Vuong, Jeni, Chen, Alex, Hu, Fang, Ba, Absetou Ky, Ouédraogo, Abdoul-Salam, Hema-Ouangraoua, Soumeya, Patel, Jaymin C., Traoré, Rasmata

Journal:

BMC Infectious Diseases

Year:

2018

Language:

english

File:

PDF, 936 KB

english, 2018

26

Antibody Persistence at the Population Level 5 Years After Mass Vaccination With Meningococcal Serogroup A Conjugate Vaccine (PsA-TT) in Burkina Faso: Need for a Booster Campaign?

Yaro, Seydou, Njanpop Lafourcade, Berthe-Marie, Ouangraoua, Soumeya, Ouoba, Aline, Kpoda, Hervé, Findlow, Helen, Tall, Haoua, Seanehia, Joy, Martin, Catherine, Ouedraogo, Jean-Bosco, Gessner, Bradford

Journal:

Clinical Infectious Diseases

Year:

2018

Language:

english

File:

PDF, 476 KB

english, 2018

27

[Lecture Notes in Computer Science] Comparative Genomics Volume 11183 (16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings) || Estimation of the True Evolutionary Distance Under the INFER Model

Blanchette, Mathieu, Ouangraoua, Aïda

Year:

2018

Language:

english

File:

PDF, 1012 KB

english, 2018

28

[Lecture Notes in Computer Science] Comparative Genomics Volume 11183 (16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings) || Linear-Time Tree Containment in Phylogenetic Networks

Blanchette, Mathieu, Ouangraoua, Aïda

Year:

2018

Language:

english

File:

PDF, 476 KB

english, 2018

29

[Lecture Notes in Computer Science] Comparative Genomics Volume 11183 (16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings) || A Cubic Algorithm for the Generalized Rank Median of Three Genomes

Blanchette, Mathieu, Ouangraoua, Aïda

Year:

2018

Language:

english

File:

PDF, 399 KB

english, 2018

30

[Lecture Notes in Computer Science] Comparative Genomics Volume 11183 (16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings) || FastNet: Fast and Accurate Statistical Inference of Phylogenetic Networks Using Large-Scale Genomic Sequence Data

Blanchette, Mathieu, Ouangraoua, Aïda

Year:

2018

Language:

english

File:

PDF, 437 KB

english, 2018

31

[Lecture Notes in Computer Science] Comparative Genomics Volume 11183 (16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings) || NJMerge: A Generic Technique for Scaling Phylogeny Estimation Methods and Its Application to Species Trees

Blanchette, Mathieu, Ouangraoua, Aïda

Year:

2018

Language:

english

File:

PDF, 457 KB

english, 2018

32

Immunogenicity and Reactogenicity of 13-Valent Pneumococcal Conjugate Vaccine Among Infants, Toddlers, and Children in Western Burkina Faso: Results From a Clinical Trial of Alternative Immunization Schedules

Moïsi, Jennifer C, Yaro, Seydou, Kroman, Sita S, Gouem, Clarisse, Bayane, Dramane, Ganama, Seydou, Meda, Bertrand, Nacro, Boubacar, Njanpop-Lafourcade, Berthe-Marie, Ouangraoua, Soumeya, Ouedraogo, Is

Journal:

Journal of the Pediatric Infectious Diseases Society

Year:

2018

Language:

english

File:

PDF, 1.37 MB

english, 2018

33

[Lecture Notes in Computer Science] Comparative Genomics Volume 11183 (16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings) || On the Variance of Internode Distance Under the Multispecies Coalescent

Blanchette, Mathieu, Ouangraoua, Aïda

Year:

2018

Language:

english

File:

PDF, 523 KB

english, 2018

34

aliFreeFold: an alignment-free approach to predict secondary structure from homologous RNA sequences

Glouzon, Jean-Pierre Séhi, Ouangraoua, Aïda

Journal:

Year:

2018

Language:

english

File:

PDF, 700 KB

english, 2018

35

Combined testing for herpes simplex virus and Mycobacterium tuberculosis DNA in cerebrospinal fluid of patients with aseptic meningitis in Burkina Faso, West Africa

Zida, Sylvie, Kolia-Diafouka, Pratt, Kania, Dramane, Sotto, Albert, Foulongne, Vincent, Bolloré, Karine, Ouangraoua, Soumeya, Méda, Nicolas, Carrère-Kremer, Séverine, Van de Perre, Philippe, Tuaillon,

Journal:

Journal of Clinical Laboratory Analysis

Year:

2018

Language:

english

File:

PDF, 388 KB

english, 2018

36

Impact of 13-Valent Pneumococcal Conjugate Vaccine on Pneumococcal Meningitis, Burkina Faso, 2016–2017

Soeters, Heidi M, Kambiré, Dinanibè, Sawadogo, Guetawendé, Ouédraogo-Traoré, Rasmata, Bicaba, Brice, Medah, Isaïe, Sangaré, Lassana, Ouédraogo, Abdoul-Salam, Ouangraoua, Soumeya, Yaméogo, Issaka, Cong

Journal:

The Journal of Infectious Diseases

Year:

2019

Language:

english

File:

PDF, 247 KB

english, 2019

37

Reconstructing the Phylogeny of Corynebacteriales While Accounting for Horizontal Gene Transfer

Da Rocha Coimbra, Nilson, Goes-Neto, Aristoteles, Azevedo, Vasco, Ouangraoua, AÃ¯da, Golding, Brian

Journal:

Genome Biology and Evolution

Year:

2020

Language:

english

File:

PDF, 1.89 MB

english, 2020

38

Evaluation of pneumococcal meningitis clusters in Burkina Faso and implications for potential reactive vaccination

Soeters, Heidi M., KambirÃ©, DinanibÃ¨, Sawadogo, GuetawendÃ©, OuÃ©draogo-TraorÃ©, Rasmata, Bicaba, Brice, Medah, IsaÃ¯e, SangarÃ©, Lassana, OuÃ©draogo, Abdoul-Salam, Ouangraoua, Soumeya, YamÃ©ogo, Is

Journal:

Year:

2020

File:

PDF, 484 KB

2020

39

CoreCruncher: fast and robust construction of core genomes in large prokaryotic datasets

Harris, Connor D, Torrance, Ellis L, Raymann, Kasie, Bobay, Louis-Marie, Ouangraoua, Aida

Journal:

Molecular Biology and Evolution

Year:

2020

File:

PDF, 953 KB

2020

40

DoubleRecViz: a Web-Based tool for visualizing Transcript-Gene-Species tree reconciliation

Kuitche, Esaie, Qi, Yanchun, Tahiri, Nadia, Parmer, Jack, Ouangraoua, AÃ¯da, Ponty, Yann

Journal:

Year:

2020

File:

PDF, 515 KB

2020

41

aliFreeFoldMulti: alignment-free method to predict secondary structures of multiple RNA homologs

Bossanyi, Marc-AndrÃ©, Carpentier, Valentin, Glouzon, Jean-Pierre S, Ouangraoua, AÃ¯da, Anselmetti, Yoann

Journal:

NAR Genomics and Bioinformatics

Year:

2020

File:

PDF, 3.26 MB

2020

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